Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
KHD75303.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa)    
Predicted Functional Partners:
KHD79186.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.935
KHD78799.1
Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.929
KHD74548.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
KHD76912.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.921
KHD78073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.892
KHD78624.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.872
KHD73134.1
Response regulator mprA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.863
KHD75150.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.862
KHD74164.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.862
KHD79315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.840
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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