STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHD75173.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)    
Predicted Functional Partners:
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.930
KHD72941.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.617
KHD72706.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.617
KHD75174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.608
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  0.551
KHD73964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.540
KHD76460.1
Band 7 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.500
KHD75451.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.486
KHD75452.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.486
KHD73710.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.486
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.