STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128415_00568Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_900128415_01988
Unannotated protein.
 
 
 0.995
GCA_900128415_01462
Unannotated protein.
 
 
 0.991
GCA_900128415_01375
Unannotated protein.
 
  
0.891
GCA_900128415_01374
Unannotated protein.
 
  
  0.890
GCA_900128415_00444
Unannotated protein.
  
  
 
0.867
GCA_900128415_01194
Unannotated protein.
  
  
 0.750
GCA_900128415_00566
Unannotated protein.
       0.589
GCA_900128415_00567
Unannotated protein.
       0.589
GCA_900128415_01469
Unannotated protein.
  
 
 0.533
GCA_900128415_01871
Unannotated protein.
  
 
 0.533
Your Current Organism:
Anaerococcus mediterraneensis
NCBI taxonomy Id: 1870984
Other names: A. mediterraneensis, Anaerococcus sp. Marseille-P2765, CSUR P2765, DSM 103343, strain Marseille P2765, strain Marseille-P2765
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.