STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155685_01803Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_900155685_02749
Unannotated protein.
  
  
 0.597
GCA_900155685_03905
Unannotated protein.
    
   0.588
GCA_900155685_02988
Unannotated protein.
  
  
 0.563
GCA_900155685_01804
Unannotated protein.
       0.558
GCA_900155685_01660
Unannotated protein.
  
  
 0.526
GCA_900155685_00842
Unannotated protein.
   
 
 0.505
GCA_900155685_03247
Unannotated protein.
   
 
 0.505
GCA_900155685_00517
Unannotated protein.
      
 0.482
GCA_900155685_01802
Unannotated protein.
       0.480
GCA_900155685_02751
Unannotated protein.
  
 
 0.476
Your Current Organism:
Paenibacillus bouchesdurhonensis
NCBI taxonomy Id: 1870990
Other names: CSUR P3071, DSM 103972, P. bouchesdurhonensis, Paenibacillus sp. Marseille-P3071, strain Marseille-P3071
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.