STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095865_00027Unannotated protein. (210 aa)    
Predicted Functional Partners:
GCA_900095865_01051
Unannotated protein.
 
      0.900
GCA_900095865_01988
Unannotated protein.
      0.900
GCA_900095865_00331
Unannotated protein.
      0.898
GCA_900095865_00997
Unannotated protein.
      0.896
GCA_900095865_00995
Unannotated protein.
      0.884
GCA_900095865_00511
Unannotated protein.
      0.876
GCA_900095865_02485
Unannotated protein.
      0.871
GCA_900095865_00406
Unannotated protein.
      0.852
GCA_900095865_02464
Unannotated protein.
    
  0.786
GCA_900095865_00166
Unannotated protein.
      0.781
Your Current Organism:
Massilioclostridium coli
NCBI taxonomy Id: 1870991
Other names: CSUR P2976, DSM 103344, M. coli, Ruminococcus sp. Marseille-P2976, strain Marseille-P2976
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.