STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900095865_01035Unannotated protein. (217 aa)    
Predicted Functional Partners:
GCA_900095865_01044
Unannotated protein.
   
 0.970
GCA_900095865_02405
Unannotated protein.
   
 0.966
GCA_900095865_00046
Unannotated protein.
    
  0.885
GCA_900095865_01327
Unannotated protein.
 
 
 0.860
GCA_900095865_01041
Unannotated protein.
  
 0.843
GCA_900095865_00022
Unannotated protein.
    
  0.742
GCA_900095865_00023
Unannotated protein.
    
  0.742
GCA_900095865_02077
Unannotated protein.
    
 0.656
GCA_900095865_02231
Unannotated protein.
    
 0.656
GCA_900095865_01034
Unannotated protein.
 
   
 0.644
Your Current Organism:
Massilioclostridium coli
NCBI taxonomy Id: 1870991
Other names: CSUR P2976, DSM 103344, M. coli, Ruminococcus sp. Marseille-P2976, strain Marseille-P2976
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.