STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104635_02582Unannotated protein. (443 aa)    
Predicted Functional Partners:
GCA_900104635_01478
Unannotated protein.
   
 0.967
GCA_900104635_02921
Unannotated protein.
     
 0.799
GCA_900104635_02583
Unannotated protein.
       0.787
GCA_900104635_01036
Unannotated protein.
  
 
  0.741
GCA_900104635_01664
Unannotated protein.
  
 
 0.732
GCA_900104635_02584
Unannotated protein.
  
    0.721
GCA_900104635_03454
Unannotated protein.
   
  0.713
GCA_900104635_00040
Unannotated protein.
    
 0.691
GCA_900104635_02514
Unannotated protein.
  
 
 0.676
GCA_900104635_03366
Unannotated protein.
  
 
0.662
Your Current Organism:
Coprococcus phoceensis
NCBI taxonomy Id: 1870993
Other names: C. phoceensis, CSUR:P3062, Tyzzerella sp. Marseille-P3062, strain Marseille-P3062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.