STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120415_00662Unannotated protein. (340 aa)    
Predicted Functional Partners:
GCA_900120415_00661
Unannotated protein.
 
  
 0.953
GCA_900120415_00562
Unannotated protein.
 
  
 0.934
GCA_900120415_01364
Unannotated protein.
   
 0.895
GCA_900120415_01043
Unannotated protein.
  
 
 0.886
GCA_900120415_00111
Unannotated protein.
  
  
 0.856
GCA_900120415_00563
Unannotated protein.
  
  
 0.855
GCA_900120415_00084
Unannotated protein.
   
 
  0.828
GCA_900120415_01054
Unannotated protein.
   
 0.823
GCA_900120415_00660
Unannotated protein.
  
  
 0.819
GCA_900120415_00167
Unannotated protein.
 
  
 0.795
Your Current Organism:
Urmitella timonensis
NCBI taxonomy Id: 1870994
Other names: CSUR P2918, Tissierella sp. Marseille-P2918, U. timonensis, strain Marseille-P2918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.