STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120415_01171Unannotated protein. (239 aa)    
Predicted Functional Partners:
GCA_900120415_01655
Unannotated protein.
   
  0.878
GCA_900120415_00965
Unannotated protein.
    
  0.843
GCA_900120415_01553
Unannotated protein.
    
  0.809
GCA_900120415_01172
Unannotated protein.
  
    0.803
GCA_900120415_00426
Unannotated protein.
    
  0.784
GCA_900120415_01594
Unannotated protein.
    
  0.784
GCA_900120415_01583
Unannotated protein.
    
  0.763
GCA_900120415_00373
Unannotated protein.
    
  0.756
GCA_900120415_00049
Unannotated protein.
   
    0.699
GCA_900120415_01660
Unannotated protein.
    
  0.677
Your Current Organism:
Urmitella timonensis
NCBI taxonomy Id: 1870994
Other names: CSUR P2918, Tissierella sp. Marseille-P2918, U. timonensis, strain Marseille-P2918
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.