STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120415_01248Unannotated protein. (200 aa)    
Predicted Functional Partners:
GCA_900120415_01249
Unannotated protein.
       0.628
GCA_900120415_01559
Unannotated protein.
  
     0.585
GCA_900120415_01024
Unannotated protein.
  
     0.544
GCA_900120415_00428
Unannotated protein.
 
   
 0.526
GCA_900120415_00686
Unannotated protein.
  
    0.526
GCA_900120415_00670
Unannotated protein.
  
     0.497
GCA_900120415_01190
Unannotated protein.
  
     0.472
GCA_900120415_01325
Unannotated protein.
 
     0.420
GCA_900120415_00179
Unannotated protein.
  
     0.418
GCA_900120415_00832
Unannotated protein.
  
     0.418
Your Current Organism:
Urmitella timonensis
NCBI taxonomy Id: 1870994
Other names: CSUR P2918, Tissierella sp. Marseille-P2918, U. timonensis, strain Marseille-P2918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.