STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104605_00769Unannotated protein. (445 aa)    
Predicted Functional Partners:
GCA_900104605_00317
Unannotated protein.
  
  
 0.817
GCA_900104605_00776
Unannotated protein.
 
  0.772
GCA_900104605_00046
Unannotated protein.
    
 0.597
GCA_900104605_01280
Unannotated protein.
 
      0.582
GCA_900104605_00768
Unannotated protein.
       0.485
GCA_900104605_02008
Unannotated protein.
    
 0.466
GCA_900104605_00775
Unannotated protein.
   
 0.429
GCA_900104605_01283
Unannotated protein.
 
      0.410
GCA_900104605_00770
Unannotated protein.
       0.406
Your Current Organism:
Tidjanibacter massiliensis
NCBI taxonomy Id: 1871003
Other names: Alistipes sp. Marseille-P3084, CSUR P3084, DSM 103552, T. massiliensis, strain Marseille-P3084
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.