STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104605_01837Unannotated protein. (435 aa)    
Predicted Functional Partners:
GCA_900104605_00472
Unannotated protein.
 
  
 0.931
GCA_900104605_00397
Unannotated protein.
 
 
 0.925
GCA_900104605_00401
Unannotated protein.
 
  
 0.860
GCA_900104605_01395
Unannotated protein.
 
  
 0.806
GCA_900104605_00400
Unannotated protein.
 
   
 0.772
GCA_900104605_00289
Unannotated protein.
 
  
 0.770
GCA_900104605_01120
Unannotated protein.
  
 
 0.755
GCA_900104605_00402
Unannotated protein.
 
   
 0.740
GCA_900104605_00832
Unannotated protein.
 
 
 0.738
GCA_900104605_00403
Unannotated protein.
 
   
 0.724
Your Current Organism:
Tidjanibacter massiliensis
NCBI taxonomy Id: 1871003
Other names: Alistipes sp. Marseille-P3084, CSUR P3084, DSM 103552, T. massiliensis, strain Marseille-P3084
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.