Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKC95100.1 | AKC95101.1 | VC03_00645 | VC03_00650 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| AKC95100.1 | AKC95102.1 | VC03_00645 | VC03_00655 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| AKC95100.1 | AKC95104.1 | VC03_00645 | VC03_00665 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.698 |
| AKC95100.1 | AKC95105.1 | VC03_00645 | VC03_00670 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.700 |
| AKC95100.1 | AKC95106.1 | VC03_00645 | VC03_00675 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
| AKC95100.1 | AKC95107.1 | VC03_00645 | VC03_00680 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein. | 0.562 |
| AKC95100.1 | mraY | VC03_00645 | VC03_00685 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.569 |
| AKC95100.1 | murD | VC03_00645 | VC03_00690 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.572 |
| AKC95100.1 | uppP | VC03_00645 | VC03_00660 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.719 |
| AKC95101.1 | AKC95100.1 | VC03_00650 | VC03_00645 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| AKC95101.1 | AKC95102.1 | VC03_00650 | VC03_00655 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AKC95101.1 | AKC95104.1 | VC03_00650 | VC03_00665 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.697 |
| AKC95101.1 | AKC95105.1 | VC03_00650 | VC03_00670 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.697 |
| AKC95101.1 | AKC95106.1 | VC03_00650 | VC03_00675 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.556 |
| AKC95101.1 | AKC95107.1 | VC03_00650 | VC03_00680 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein. | 0.562 |
| AKC95101.1 | mraY | VC03_00650 | VC03_00685 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.566 |
| AKC95101.1 | murD | VC03_00650 | VC03_00690 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.555 |
| AKC95101.1 | uppP | VC03_00650 | VC03_00660 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.723 |
| AKC95102.1 | AKC95100.1 | VC03_00655 | VC03_00645 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| AKC95102.1 | AKC95101.1 | VC03_00655 | VC03_00650 | Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
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