Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKC95287.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)    
Predicted Functional Partners:
AKC95285.1
Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.998
AKC95288.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
AKC95101.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
AKC96116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
AKC95214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
AKC95286.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
AKC95099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.976
AKC95102.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
AKC95100.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.919
AKC95952.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.853
Your Current Organism:
Sneathia amnii
NCBI taxonomy Id: 187101
Other names: Leptotrichia amnionii, S. amnii, Sneathia sp. Sn35, cf. Leptotrichia sp. AMN-1, strain Sn35
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