Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
AKC96023.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)    
Predicted Functional Partners:
AKC96024.1
PTS system ascorbate-specific transporter subunit IIC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
AKC96025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
AKC96020.1
Ascorbate 6-phosphate lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
AKC95034.1
PTS beta-glucoside transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.924
AKC96022.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.923
AKC95218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.906
AKC95739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.906
AKC95035.1
PTS ascorbate transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AKC96019.1
L-xylulose 5-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.891
AKC96021.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.671
Your Current Organism:
Sneathia amnii
NCBI taxonomy Id: 187101
Other names: Leptotrichia amnionii, S. amnii, Sneathia sp. Sn35, cf. Leptotrichia sp. AMN-1, strain Sn35
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