STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169975_00494Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_900169975_01600
Unannotated protein.
  
     0.770
GCA_900169975_00443
Unannotated protein.
  
  
 0.743
GCA_900169975_01017
Unannotated protein.
  
  
 0.667
GCA_900169975_00490
Unannotated protein.
 
  
 0.523
GCA_900169975_00488
Unannotated protein.
 
  
 0.478
GCA_900169975_00493
Unannotated protein.
       0.466
GCA_900169975_03132
Unannotated protein.
 
  
 0.445
GCA_900169975_00492
Unannotated protein.
       0.416
GCA_900169975_00987
Unannotated protein.
     
 0.405
GCA_900169975_00491
Unannotated protein.
       0.404
Your Current Organism:
Pseudoflavonifractor sp. MarseilleP3106
NCBI taxonomy Id: 1871015
Other names: P. sp. Marseille-P3106, Pseudoflavonifractor sp. Marseille-P3106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.