STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169975_03053Unannotated protein. (674 aa)    
Predicted Functional Partners:
GCA_900169975_02354
Unannotated protein.
  
  
 0.805
GCA_900169975_03054
Unannotated protein.
       0.773
GCA_900169975_03055
Unannotated protein.
       0.773
GCA_900169975_01887
Unannotated protein.
    
 
 0.722
GCA_900169975_03056
Unannotated protein.
 
     0.707
GCA_900169975_00104
Unannotated protein.
   
   0.704
GCA_900169975_02920
Unannotated protein.
 
  
 0.655
GCA_900169975_02298
Unannotated protein.
 
   
 0.649
GCA_900169975_02943
Unannotated protein.
 
 
 
 0.621
GCA_900169975_02757
Unannotated protein.
  
   
 0.595
Your Current Organism:
Pseudoflavonifractor sp. MarseilleP3106
NCBI taxonomy Id: 1871015
Other names: P. sp. Marseille-P3106, Pseudoflavonifractor sp. Marseille-P3106
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.