STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104675_00834Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_900104675_01946
Unannotated protein.
    
  0.857
GCA_900104675_02163
Unannotated protein.
    
 0.735
GCA_900104675_01831
Unannotated protein.
  
  
 0.648
GCA_900104675_00550
Unannotated protein.
  
    0.594
GCA_900104675_03402
Unannotated protein.
  
  
 0.581
GCA_900104675_00841
Unannotated protein.
 
    0.537
GCA_900104675_01032
Unannotated protein.
  
  
 0.517
GCA_900104675_00839
Unannotated protein.
 
    0.482
GCA_900104675_01105
Unannotated protein.
  
  
  0.481
GCA_900104675_01701
Unannotated protein.
  
  
  0.481
Your Current Organism:
Angelakisella massiliensis
NCBI taxonomy Id: 1871018
Other names: A. massiliensis, CSUR P3217, Ruminococcus sp. Marseille-P3217, strain Marseille-P3217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.