STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104675_01867Unannotated protein. (725 aa)    
Predicted Functional Partners:
GCA_900104675_03276
Unannotated protein.
  
 
  0.925
GCA_900104675_03017
Unannotated protein.
  
 
  0.873
GCA_900104675_00792
Unannotated protein.
  
  
  0.564
GCA_900104675_02163
Unannotated protein.
  
 
 0.531
GCA_900104675_01100
Unannotated protein.
 
  
  0.519
GCA_900104675_03046
Unannotated protein.
  
  
  0.505
GCA_900104675_03047
Unannotated protein.
  
  
  0.495
GCA_900104675_00556
Unannotated protein.
    
  0.471
GCA_900104675_02845
Unannotated protein.
    
  0.456
GCA_900104675_00857
Unannotated protein.
    
  0.442
Your Current Organism:
Angelakisella massiliensis
NCBI taxonomy Id: 1871018
Other names: A. massiliensis, CSUR P3217, Ruminococcus sp. Marseille-P3217, strain Marseille-P3217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.