STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120155_01414Unannotated protein. (653 aa)    
Predicted Functional Partners:
GCA_900120155_00212
Unannotated protein.
   
   0.945
GCA_900120155_00223
Unannotated protein.
  
  
 0.879
GCA_900120155_01857
Unannotated protein.
  
 
 
 0.869
GCA_900120155_01653
Unannotated protein.
  
  
 0.860
GCA_900120155_01413
Unannotated protein.
       0.809
GCA_900120155_01412
Unannotated protein.
       0.781
GCA_900120155_02788
Unannotated protein.
 
 
 
 0.772
GCA_900120155_01411
Unannotated protein.
       0.768
GCA_900120155_02125
Unannotated protein.
 
  
 0.731
GCA_900120155_02046
Unannotated protein.
 
  
 0.729
Your Current Organism:
Clostridium sp. MarseilleP3244
NCBI taxonomy Id: 1871020
Other names: C. sp. Marseille-P3244, Clostridium sp. Marseille-P3244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.