STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900143685_00050Unannotated protein. (496 aa)    
Predicted Functional Partners:
GCA_900143685_00049
Unannotated protein.
 
    
0.760
GCA_900143685_01756
Unannotated protein.
 
  
 0.598
GCA_900143685_00114
Unannotated protein.
  
    0.560
GCA_900143685_01778
Unannotated protein.
  
    0.560
GCA_900143685_00607
Unannotated protein.
   
    0.551
GCA_900143685_01804
Unannotated protein.
   
    0.544
GCA_900143685_00895
Unannotated protein.
  
     0.539
GCA_900143685_00471
Unannotated protein.
 
  
 0.508
GCA_900143685_00051
Unannotated protein.
       0.466
GCA_900143685_01627
Unannotated protein.
  
     0.466
Your Current Organism:
Libanicoccus massiliensis
NCBI taxonomy Id: 1871022
Other names: CCUG 71182, CSUR:P 3237, CSURP 3237, CSURP:3237, L. massiliensis, Libanicoccus massiliensis Bilen et al. 2018, Olsenella sp. Marseille-P3237, strain Marseille-P3237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.