STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900143685_01305Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_900143685_01244
Unannotated protein.
  
  
 0.668
GCA_900143685_00534
Unannotated protein.
  
  
 0.588
GCA_900143685_01245
Unannotated protein.
  
  
 0.588
GCA_900143685_01303
Unannotated protein.
  
  
 0.503
GCA_900143685_00233
Unannotated protein.
  
  
 0.482
GCA_900143685_01304
Unannotated protein.
       0.462
GCA_900143685_01302
Unannotated protein.
       0.461
GCA_900143685_00055
Unannotated protein.
    
   0.455
GCA_900143685_00056
Unannotated protein.
    
   0.455
GCA_900143685_01213
Unannotated protein.
  
  
 0.423
Your Current Organism:
Libanicoccus massiliensis
NCBI taxonomy Id: 1871022
Other names: CCUG 71182, CSUR:P 3237, CSURP 3237, CSURP:3237, L. massiliensis, Libanicoccus massiliensis Bilen et al. 2018, Olsenella sp. Marseille-P3237, strain Marseille-P3237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.