STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120375_00306Unannotated protein. (133 aa)    
Predicted Functional Partners:
GCA_900120375_00305
Unannotated protein.
 
   
 0.883
GCA_900120375_00295
Unannotated protein.
 
    0.832
GCA_900120375_00307
Unannotated protein.
 
     0.829
GCA_900120375_00312
Unannotated protein.
 
   
 0.818
GCA_900120375_00299
Unannotated protein.
 
    0.764
GCA_900120375_00297
Unannotated protein.
 
  
 0.736
GCA_900120375_00300
Unannotated protein.
 
     0.691
GCA_900120375_00524
Unannotated protein.
  
  
 0.689
GCA_900120375_00294
Unannotated protein.
 
    0.673
GCA_900120375_00890
Unannotated protein.
  
 
 0.662
Your Current Organism:
Ndongobacter massiliensis
NCBI taxonomy Id: 1871025
Other names: CSUR P3170, Levyella sp. Marseille-P3170, N. massiliensis, strain Marseille-P3170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.