STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155595_00480Unannotated protein. (470 aa)    
Predicted Functional Partners:
GCA_900155595_00481
Unannotated protein.
 
 
   0.923
GCA_900155595_01768
Unannotated protein.
 
 0.900
GCA_900155595_01633
Unannotated protein.
 
 0.892
GCA_900155595_01172
Unannotated protein.
  
 
 
 0.861
GCA_900155595_00371
Unannotated protein.
  
 
   0.771
GCA_900155595_01771
Unannotated protein.
 
 
   0.769
GCA_900155595_01632
Unannotated protein.
 
 
 
 0.709
GCA_900155595_01631
Unannotated protein.
 
 
 
 0.693
GCA_900155595_01769
Unannotated protein.
 
 
   0.677
GCA_900155595_00474
Unannotated protein.
 
    0.670
Your Current Organism:
Actinomyces mediterranea
NCBI taxonomy Id: 1871028
Other names: A. mediterranea, Actinomyces sp. Marseille-P3257, CCUG 70143, CSUR P3257, strain Marseille-P3257
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.