STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155395_01193Unannotated protein. (210 aa)    
Predicted Functional Partners:
GCA_900155395_01192
Unannotated protein.
 
  
 0.937
GCA_900155395_01161
Unannotated protein.
    
  0.834
GCA_900155395_01194
Unannotated protein.
  
  
 0.754
GCA_900155395_01283
Unannotated protein.
  
  
 0.738
GCA_900155395_00215
Unannotated protein.
  
  
 0.737
GCA_900155395_00023
Unannotated protein.
 
 
 0.722
GCA_900155395_01596
Unannotated protein.
  
    0.717
GCA_900155395_01446
Unannotated protein.
   
  
 0.710
GCA_900155395_01585
Unannotated protein.
  
     0.689
GCA_900155395_01030
Unannotated protein.
  
     0.687
Your Current Organism:
Merdibacter massiliensis
NCBI taxonomy Id: 1871030
Other names: CSUR P3254, Eubacterium sp. Marseille-P3254, M. massiliensis, strain Marseille-P3254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.