STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155395_01706Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_900155395_01707
Unannotated protein.
     0.995
GCA_900155395_02073
Unannotated protein.
   
 0.980
GCA_900155395_00125
Unannotated protein.
    
  0.975
GCA_900155395_01137
Unannotated protein.
   
 0.975
GCA_900155395_01588
Unannotated protein.
  
 0.956
GCA_900155395_01711
Unannotated protein.
     0.935
GCA_900155395_01775
Unannotated protein.
   
  0.879
GCA_900155395_00401
Unannotated protein.
   
 0.846
GCA_900155395_01705
Unannotated protein.
 
   
 0.802
GCA_900155395_00877
Unannotated protein.
  
    0.705
Your Current Organism:
Merdibacter massiliensis
NCBI taxonomy Id: 1871030
Other names: CSUR P3254, Eubacterium sp. Marseille-P3254, M. massiliensis, strain Marseille-P3254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.