STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155395_02395Unannotated protein. (475 aa)    
Predicted Functional Partners:
GCA_900155395_01553
Unannotated protein.
  
 
 0.882
GCA_900155395_00964
Unannotated protein.
   
 0.879
GCA_900155395_01126
Unannotated protein.
  
 
  0.876
GCA_900155395_01441
Unannotated protein.
   
 0.628
GCA_900155395_00056
Unannotated protein.
    
 0.624
GCA_900155395_00006
Unannotated protein.
  
 
 0.623
GCA_900155395_02270
Unannotated protein.
  
 
 0.617
GCA_900155395_01882
Unannotated protein.
   
 
 0.616
GCA_900155395_00595
Unannotated protein.
  
 
 0.604
GCA_900155395_01948
Unannotated protein.
    
 0.548
Your Current Organism:
Merdibacter massiliensis
NCBI taxonomy Id: 1871030
Other names: CSUR P3254, Eubacterium sp. Marseille-P3254, M. massiliensis, strain Marseille-P3254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.