STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900148495_00215Unannotated protein. (579 aa)    
Predicted Functional Partners:
GCA_900148495_00216
Unannotated protein.
 
    
0.711
GCA_900148495_00152
Unannotated protein.
   
  0.688
GCA_900148495_02710
Unannotated protein.
   
  0.688
GCA_900148495_00217
Unannotated protein.
 
    
0.633
GCA_900148495_02759
Unannotated protein.
    
  0.601
GCA_900148495_00218
Unannotated protein.
 
    
0.572
GCA_900148495_00219
Unannotated protein.
 
    
0.504
GCA_900148495_00214
Unannotated protein.
  
    0.497
GCA_900148495_00220
Unannotated protein.
 
    
0.483
GCA_900148495_01434
Unannotated protein.
   
    0.442
Your Current Organism:
Negativibacillus massiliensis
NCBI taxonomy Id: 1871035
Other names: CSUR P3213, DSM 103594, N. massiliensis, Ruminococcus sp. Marseille-P3213, strain Marseille-P3213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.