STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900148495_00281Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_900148495_01180
Unannotated protein.
  
 
  0.783
GCA_900148495_00280
Unannotated protein.
       0.642
GCA_900148495_00753
Unannotated protein.
    
  0.534
GCA_900148495_00594
Unannotated protein.
  
 
  0.506
GCA_900148495_00279
Unannotated protein.
  
    0.500
GCA_900148495_00276
Unannotated protein.
  
    0.470
GCA_900148495_00282
Unannotated protein.
       0.443
GCA_900148495_00887
Unannotated protein.
   
 
  0.436
GCA_900148495_01075
Unannotated protein.
   
    0.426
GCA_900148495_00583
Unannotated protein.
  
    0.422
Your Current Organism:
Negativibacillus massiliensis
NCBI taxonomy Id: 1871035
Other names: CSUR P3213, DSM 103594, N. massiliensis, Ruminococcus sp. Marseille-P3213, strain Marseille-P3213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.