STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900148495_01390Unannotated protein. (112 aa)    
Predicted Functional Partners:
GCA_900148495_00748
Unannotated protein.
      0.729
GCA_900148495_01389
Unannotated protein.
       0.678
GCA_900148495_01391
Unannotated protein.
   
   0.642
GCA_900148495_02759
Unannotated protein.
   
   0.578
GCA_900148495_00195
Unannotated protein.
  
 0.560
GCA_900148495_00015
Unannotated protein.
  
   0.529
GCA_900148495_00096
Unannotated protein.
  
  
  0.525
GCA_900148495_00775
Unannotated protein.
 
 
   0.485
GCA_900148495_02122
Unannotated protein.
   
    0.439
GCA_900148495_01025
Unannotated protein.
   
 
 0.437
Your Current Organism:
Negativibacillus massiliensis
NCBI taxonomy Id: 1871035
Other names: CSUR P3213, DSM 103594, N. massiliensis, Ruminococcus sp. Marseille-P3213, strain Marseille-P3213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.