STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900148495_01648Unannotated protein. (770 aa)    
Predicted Functional Partners:
GCA_900148495_01842
Unannotated protein.
  
 0.953
GCA_900148495_00179
Unannotated protein.
  
 0.894
GCA_900148495_01245
Unannotated protein.
  
 0.894
GCA_900148495_01998
Unannotated protein.
  
 0.894
GCA_900148495_00249
Unannotated protein.
   
 0.812
GCA_900148495_01319
Unannotated protein.
   
 0.812
GCA_900148495_00094
Unannotated protein.
   
 0.806
GCA_900148495_00865
Unannotated protein.
 
 0.804
GCA_900148495_00011
Unannotated protein.
   
 0.798
GCA_900148495_01626
Unannotated protein.
   
 0.798
Your Current Organism:
Negativibacillus massiliensis
NCBI taxonomy Id: 1871035
Other names: CSUR P3213, DSM 103594, N. massiliensis, Ruminococcus sp. Marseille-P3213, strain Marseille-P3213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.