STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCL29991.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (119 aa)    
Predicted Functional Partners:
OCL29343.1
PTS acetylgalactosamine transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OCL30371.1
PTS acetylgalactosamine transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
agaB
PTS N-acetylgalactosamine transporter subunit IIB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
OCL30370.1
PTS N-acetylgalactosamine transporter subunit IIB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
OCL29345.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
OCL30373.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
OCL36115.1
PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.663
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
  0.575
OCL36117.1
PTS ascorbate transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.556
OCL32308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.556
Your Current Organism:
Criibacterium bergeronii
NCBI taxonomy Id: 1871336
Other names: C. bergeronii, Peptostreptococcaceae bacterium CCRI-22567, strain CCRI-22567
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.