STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0204PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: csa:Csal_1199 succinylglutamate desuccinylase/aspartoacylase. (353 aa)    
Predicted Functional Partners:
rimK
SSU ribosomal protein S6P modification protein; TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: hch:HCH_00778 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the RimK family.
     0.838
Mlg_2265
PFAM: protein of unknown function DUF785; KEGG: cbu:CBU_1601 hypothetical protein.
 
     0.823
Mlg_0205
PFAM: transferase hexapeptide repeat containing protein; KEGG: pae:PA0066 hypothetical protein.
       0.774
Mlg_0771
PFAM: protein of unknown function DUF785; KEGG: csa:Csal_1879 protein of unknown function DUF785.
 
     0.667
Mlg_0206
PFAM: UspA domain protein; KEGG: mbo:Mb2051c hypothetical protein.
       0.590
Mlg_0203
PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_3345 major facilitator superfamily MFS_1.
       0.588
Mlg_0202
PFAM: thiamineS protein; KEGG: aci:ACIAD1905 hypothetical protein.
       0.562
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.