STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0232TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mca:MCA1754 monooxygenase, FAD-binding. (398 aa)    
Predicted Functional Partners:
Mlg_0910
3-demethylubiquinone-9 3-methyltransferase; KEGG: csa:Csal_1858 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12.
 
 
 0.965
Mlg_0069
TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dar:Daro_4117 ubiquinone/menaquinone biosynthesis methyltransferase.
  
 
 0.930
Mlg_0381
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: lma:LmjF28.2160 hypothetical protein, conserved.
   
 0.920
Mlg_0231
KEGG: cvi:CV1996 hypothetical protein.
       0.773
Mlg_2438
TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: noc:Noc_1217 4-hydroxybenzoate polyprenyl transferase.
  
   
 0.699
Mlg_2634
PFAM: coproporphyrinogen III oxidase; KEGG: hch:HCH_00036 coproporphyrinogen III oxidase.
  
  
 0.581
Mlg_0230
PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: par:Psyc_2129 possible OmpA family protein.
       0.521
Mlg_0595
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ilo:IL1804 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
    0.512
Mlg_0071
TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: noc:Noc_2345 2-polyprenylphenol 6-hydroxylase.
 
 
 0.508
Mlg_0287
KEGG: noc:Noc_1326 sterol desaturase-related protein.
   
 
 0.505
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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