STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0426TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csa:Csal_2578 HAD-superfamily subfamily IB, PSPase-like protein. (231 aa)    
Predicted Functional Partners:
Mlg_0424
PFAM: LrgB family protein; KEGG: csa:Csal_1794 LrgB-like protein.
  
  
 0.785
Mlg_0577
PFAM: tRNA synthetase, class II (G, H, P and S); KEGG: mca:MCA1979 ATP phosphoribosyltransferase regulatory subunit.
 
    0.777
Mlg_0425
PFAM: LrgA family protein; KEGG: csa:Csal_1793 LrgA.
       0.773
Mlg_0423
PFAM: dihydrofolate reductase region; KEGG: bmb:BruAb1_1393 FolA, dihydrofolate reductase.
  
  
 0.735
hisF
Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
  
 0.735
Mlg_0427
PFAM: NUDIX hydrolase; KEGG: csa:Csal_2577 NUDIX hydrolase.
 
     0.692
Mlg_0428
PTSINtr with GAF domain, PtsP; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: ppu:PP5145 phosphoenolpyruvate-protein phosphotransferase PtsP.
       0.625
Mlg_2616
TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: ppu:PP0290 glutamine amidotransferase HisH.
  
  
 0.624
Mlg_1201
PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: csa:Csal_1883 phosphoribosyl-AMP cyclohydrolase.
  
  
 0.608
Mlg_2617
PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: pfo:Pfl_0323 imidazoleglycerol-phosphate dehydratase.
  
  
 0.591
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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