STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0428PTSINtr with GAF domain, PtsP; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: ppu:PP5145 phosphoenolpyruvate-protein phosphotransferase PtsP. (754 aa)    
Predicted Functional Partners:
Mlg_2234
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sde:Sde_3182 HNH nuclease.
  
 
 
 0.931
Mlg_0427
PFAM: NUDIX hydrolase; KEGG: csa:Csal_2577 NUDIX hydrolase.
  
    0.813
Mlg_2232
PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: noc:Noc_2795 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
   
 0.807
Mlg_0426
TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csa:Csal_2578 HAD-superfamily subfamily IB, PSPase-like protein.
       0.625
Mlg_0429
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: aci:ACIAD3328 putative regulatory or redox component complexing with Bfr, in iron storage and mobility (Bfd).
       0.576
Mlg_0423
PFAM: dihydrofolate reductase region; KEGG: bmb:BruAb1_1393 FolA, dihydrofolate reductase.
       0.505
Mlg_0424
PFAM: LrgB family protein; KEGG: csa:Csal_1794 LrgB-like protein.
       0.500
Mlg_0425
PFAM: LrgA family protein; KEGG: csa:Csal_1793 LrgA.
       0.500
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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