STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0800Conserved hypothetical protein; PFAM: lipopolysaccharide biosynthesis; KEGG: ade:Adeh_4274 tyrosine kinase. (721 aa)    
Predicted Functional Partners:
Mlg_0799
PFAM: polysaccharide export protein; KEGG: neu:NE2279 polysaccharide export protein.
 
 
 0.995
Mlg_0160
PFAM: polysaccharide export protein; KEGG: neu:NE1805 putative polysaccharide export protein, outer membrane.
 
 
 0.962
Mlg_0101
KEGG: tbd:Tbd_2498 hypothetical protein.
  
 
 0.948
Mlg_0159
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: eba:ebA40 putative glycosyltransferase.
 
  
 0.925
Mlg_0798
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rso:RSp1019 low molecular weight protein-tyrosine-phosphatase.
 
 
 0.920
Mlg_0802
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: psb:Psyr_3636 polysaccharide biosynthesis protein CapD.
 
  
 0.838
Mlg_0801
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: son:SO3171 polysaccharide biosynthesis protein.
 
  
 0.837
Mlg_0100
KEGG: dde:Dde_2931 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
 
  
 0.822
Mlg_2512
NAD-dependent formate dehydrogenase flavoprotein subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mca:MCA2577 dehydrogenase subunit, putative.
     
 0.816
Mlg_2322
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: par:Psyc_0653 polysaccharide biosynthesis protein CapD.
  
  
 0.812
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.