STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0840Hypothetical protein. (868 aa)    
Predicted Functional Partners:
Mlg_0839
KEGG: pst:PSPTO2537 hypothetical protein.
       0.786
Mlg_0838
PFAM: Rhs element Vgr protein; KEGG: eca:ECA2104 VgrG protein.
      0.781
Mlg_0841
KEGG: xoo:XOO3467 hypothetical protein.
       0.781
Mlg_0842
Hypothetical protein.
       0.773
Mlg_0843
Hypothetical protein.
       0.709
Mlg_0844
Hypothetical protein.
       0.459
Mlg_0837
PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: csa:Csal_0978 cyclic nucleotide-binding domain (cNMP-BD) protein.
       0.429
Mlg_0836
PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: csa:Csal_0979 exonuclease.
       0.419
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.