STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0875PFAM: aldehyde dehydrogenase; KEGG: eba:ebA2996 succinate-semialdehyde dehydrogenase. (483 aa)    
Predicted Functional Partners:
Mlg_0491
PFAM: aminotransferase class-III; KEGG: sco:SCO7034 putative aminotransferase (fragment).
 0.946
Mlg_1334
KEGG: mca:MCA1550 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.935
Mlg_1335
KEGG: xcb:XC_1985 succinate dehydrogenase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.927
Mlg_1332
PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mag:amb3950 succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
 
  0.905
Mlg_1333
PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mca:MCA1549 succinate dehydrogenase, hydrophobic membrane anchor protein, putative.
   
 
 0.905
Mlg_2591
PFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: sru:SRU_2373 phosphoenolpyruvate carboxykinase (ATP).
  
 
 0.902
Mlg_2627
TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mca:MCA2844 methionyl-tRNA formyltransferase.
 
    
 0.902
Mlg_2752
KEGG: rru:Rru_A1600 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
 0.884
Mlg_0697
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rru:Rru_A2721 2-oxoglutarate synthase, alpha subunit.
   
 0.877
Mlg_0788
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: nar:Saro_1757 pyruvate flavodoxin/ferredoxin oxidoreductase-like.
   
 0.877
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.