STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0895PFAM: flagellar hook capping protein; KEGG: hch:HCH_04480 flagellar hook capping protein. (222 aa)    
Predicted Functional Partners:
Mlg_0893
TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: noc:Noc_2378 flagellar basal-body rod protein FlgB.
 
 
 0.999
Mlg_0894
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cps:CPS_1478 flagellar basal-body rod protein FlgC.
 
 0.999
Mlg_0896
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: xcb:XC_2237 flagellar biosynthesis, hook protein.
 
 0.999
Mlg_0901
KEGG: hch:HCH_04474 muramidase (flagellum-specific); TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
 
  
 0.999
Mlg_0897
TIGRFAM: flagellar basal-body rod protein FlgF; KEGG: noc:Noc_2374 protein of unknown function DUF1078.
 
 
 0.998
Mlg_0898
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: noc:Noc_2373 hypothetical protein.
 
 
 0.997
Mlg_0709
TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: noc:Noc_2359 flagellar FliF M-ring protein.
 
 
 0.996
Mlg_0899
PFAM: flagellar L-ring protein; KEGG: pae:PA1083 flagellar L-ring protein precursor FlgH.
 
 
 0.996
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.996
Mlg_0708
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: noc:Noc_2360 flagellar hook-basal body complex protein FliE.
 
 
 0.995
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.