STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0958KEGG: noc:Noc_0904 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain. (695 aa)    
Predicted Functional Partners:
Mlg_0957
KEGG: mca:MCA1476 glycogen synthase; TIGRFAM: glycogen/starch synthases, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein.
 
 0.999
Mlg_0956
KEGG: neu:NE0074 putative alpha-glucan phosphorylase, putative; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.
  
 0.998
Mlg_0959
TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mca:MCA1474 glucose-1-phosphate adenylyltransferase.
  
 0.981
Mlg_0961
KEGG: mca:MCA1473 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
 
 0.981
Mlg_0655
KEGG: noc:Noc_0905 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase.
  
 0.968
Mlg_2361
PFAM: isochorismatase hydrolase; aldehyde dehydrogenase; KEGG: bbr:BB0641 putative aldehyde dehydrogenase.
  
  
 0.634
Mlg_0290
PFAM: phosphoglucose isomerase (PGI); KEGG: pca:Pcar_2367 glucose-6-phosphate isomerase.
  
  
 0.613
Mlg_2763
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: hch:HCH_05965 glutamate synthase domain 2.
      
 0.601
Mlg_1973
TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: noc:Noc_2567 phosphoglucosamine mutase.
  
  
 0.590
Mlg_2845
Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: noc:Noc_2994 phosphomannomutase.
  
  
 0.590
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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