STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_0991PFAM: CheW domain protein; KEGG: ppu:PP4333 CheW domain protein. (290 aa)    
Predicted Functional Partners:
Mlg_0891
PFAM: response regulator receiver; CheW domain protein; KEGG: pae:PA3349 probable chemotaxis protein.
 
 0.997
Mlg_0988
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: pae:PA1458 probable two-component sensor.
 
 0.997
Mlg_0989
PFAM: CheB methylesterase; response regulator receiver; KEGG: pst:PSPTO1983 protein-glutamate methylesterase CheB.
 
 
 0.997
Mlg_0992
PFAM: CheW domain protein; KEGG: sde:Sde_2155 flagellar FliF M-ring protein.
 
 
 0.996
Mlg_1118
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; PAS fold-4 domain protein; KEGG: gme:Gmet_0780 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 
 0.994
Mlg_1098
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4053 methyl-accepting chemotaxis protein.
 
 0.990
Mlg_0359
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: noc:Noc_0126 CheA signal transduction histidine kinase.
  
 
 0.989
Mlg_0987
PFAM: Chemotaxis phosphatase, CheZ; KEGG: sdn:Sden_1345 chemotaxis phosphatase, CheZ.
 
  
 0.984
Mlg_0986
PFAM: response regulator receiver; KEGG: vpa:VP2231 chemotaxis protein CheY.
 
 
  0.968
Mlg_1937
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dar:Daro_0926 histidine kinase, HAMP region:bacterial chemotaxis sensory transducer.
 
 0.957
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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