STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1208PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: noc:Noc_0394 protein of unknown function DUF523. (326 aa)    
Predicted Functional Partners:
Mlg_2256
Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rru:Rru_A2903 deoxyribodipyrimidine photolyase.
  
  
 0.935
Mlg_2255
PFAM: regulatory protein, MerR; KEGG: csa:Csal_0466 transcriptional regulator, MerR family.
 
  
 0.774
Mlg_1207
TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase, GCS2; KEGG: rru:Rru_A0570 glutamate--cysteine ligase.
     
 0.713
Mlg_1211
PFAM: molybdopterin binding domain; KEGG: eba:ebA4355 predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA.
       0.689
Mlg_1209
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: noc:Noc_2937 secretion protein HlyD.
       0.631
Mlg_1210
PFAM: acriflavin resistance protein; KEGG: noc:Noc_2936 acriflavin resistance protein.
       0.631
Mlg_1212
Hypothetical protein.
       0.631
Mlg_1035
TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; ExsB family protein; KEGG: mta:Moth_0198 thiamine biosynthesis.
 
     0.575
Mlg_0602
PFAM: peptidase S16, lon domain protein; KEGG: dar:Daro_0066 peptidase S16, lon N-terminal.
     
 0.559
Mlg_0761
PFAM: regulatory protein, MerR; KEGG: noc:Noc_1147 transcriptional regulatory protein, MerR family.
 
  
 0.473
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.