STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1218TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: noc:Noc_2350 SecD export membrane protein. (621 aa)    
Predicted Functional Partners:
Mlg_1219
TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: noc:Noc_2349 SecF protein.
0.999
Mlg_2882
Protein translocase subunit yidC; PFAM: 60 kDa inner membrane insertion protein; KEGG: mfa:Mfla_2758 60 kDa inner membrane insertion protein.
  
 
 0.905
Mlg_1217
TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ftl:FTL_0847 preprotein translocase family protein.
 
  
 0.904
Mlg_1971
TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ilo:IL0971 biopolymer transport protein.
 
 
 
 0.877
Mlg_1216
TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: tcx:Tcr_1332 preprotein translocase, YajC subunit.
 
  
 0.839
Mlg_0478
TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: noc:Noc_2305 SecY protein.
  
 
 0.833
Mlg_0763
KEGG: mca:MCA0698 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
  
 
 0.809
Mlg_1345
KEGG: mca:MCA1465 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Serine peptidase; MEROPS family S26A.
 
  
 0.788
Mlg_0445
TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: csa:Csal_0408 SecE subunit of protein translocation complex.
  
 
 0.779
Mlg_1481
alanyl-tRNA synthetase; KEGG: noc:Noc_0926 alanine--tRNA ligase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase, class IIc; phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD.
  
    0.734
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.