STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1221PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mag:amb2153 putative Ser protein kinase. (648 aa)    
Predicted Functional Partners:
Mlg_1222
PFAM: protein of unknown function DUF444; KEGG: mag:amb2154 hypothetical protein.
  
 0.998
Mlg_1223
PFAM: SpoVR family protein; KEGG: mag:amb2155 hypothetical protein.
 
  
 0.995
Mlg_0957
KEGG: mca:MCA1476 glycogen synthase; TIGRFAM: glycogen/starch synthases, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein.
   
    0.692
Mlg_2089
PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: csa:Csal_0375 fructose-bisphosphate aldolase.
   
    0.528
Mlg_2481
PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: noc:Noc_1210 PhoH-like protein.
   
  
 0.526
Mlg_0007
Trehalose 6-phosphate synthase; PFAM: glycosyl transferase, family 20; KEGG: rru:Rru_A2485 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
   
    0.520
Mlg_1220
Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: xcb:XC_1246 hypothetical protein.
       0.515
Mlg_0005
KEGG: stt:t0948 trehalose phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; sucrose-6F-phosphate phosphohydrolase.
   
    0.511
Mlg_2691
Fructosamine kinase; PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: syf:Synpcc7942_1985 hypothetical protein.
   
    0.510
Mlg_0520
KEGG: noc:Noc_0187 flavodoxin/nitric oxide synthase.
   
    0.472
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.