STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1663PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3377 Fe-S-cluster-containing hydrogenase components 1. (261 aa)    
Predicted Functional Partners:
Mlg_2426
Molybdopterin oxidoreductase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsy:DSY4131 putative anaerobic dehydrogenase.
 0.976
Mlg_0633
Molybdopterin oxidoreductase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: tth:TTC0155 thiosulfate reductase precursor.
 0.974
Mlg_1664
PFAM: Polysulphide reductase, NrfD; KEGG: mag:amb3378 Hdr-like menaquinol oxidoreductase integral membrane subunit.
 
 
 0.966
Mlg_1662
Hypothetical protein; KEGG: mag:amb3376 Hdr-like menaquinol oxidoreductase cytochrome c subunit.
 
  
 0.949
Mlg_0634
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA1012 molybdenum enzyme of unknown function, medium subunit.
  
  
 
0.921
Mlg_1180
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: sme:SMb21549 putative exported sulfurtransferase, rhodanese protein.
     
 0.900
Mlg_1269
Conserved hypothetical protein; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpa:RPA1367 sulfur oxidation protein SoxY.
     
  0.900
Mlg_1647
SMART: Rhodanese domain protein; KEGG: sco:SCO5854 thiosulfate sulfurtransferase.
     
 0.900
Mlg_1681
Thiosulfate-binding protein SoxY; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: tcx:Tcr_0603 sulfur oxidation protein SoxY-like.
     
  0.900
Mlg_1682
Sulfur compound chelating protein SoxZ; KEGG: bja:bll1012 sulfur oxidation protein.
     
  0.900
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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