STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_1709KEGG: noc:Noc_0497 membrane protein-like. (224 aa)    
Predicted Functional Partners:
Mlg_1710
Recombination protein MgsA; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: pae:PA2613 putative ATPase.
       0.741
Mlg_1711
PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: eba:ebA7039 outer membrane lipoprotein carrier protein LolA.
       0.741
Mlg_1712
DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; KEGG: sde:Sde_1693 cell division protein FtsK.
       0.635
Mlg_1913
PFAM: peptidase M42 family protein; KEGG: dge:Dgeo_1994 peptidase M42.
  
     0.425
Mlg_1713
Leucyltransferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: noc:Noc_2596 leucyltransferase.
       0.410
Mlg_1714
Arginyltransferase; PFAM: Arginine-tRNA-protein transferase, N-terminal domain protein; Arginine-tRNA-protein transferase, C-terminal domain protein; KEGG: noc:Noc_2597 arginyltransferase.
       0.410
Mlg_1934
PFAM: NnrS family protein; KEGG: neu:NE1696 hypothetical protein.
  
     0.408
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.