STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2083PFAM: protein of unknown function DUF1342; KEGG: mca:MCA2091 hypothetical protein. (285 aa)    
Predicted Functional Partners:
Mlg_2082
KEGG: sgl:SG0461 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase.
 
    0.986
Mlg_2081
PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: dar:Daro_0637 peptidase A24A, prepilin type IV:peptidase A24A, N-terminal; Aspartic peptidase; MEROPS family A24A.
  
    0.856
Mlg_2080
PFAM: type II secretion system protein; KEGG: noc:Noc_0311 type II secretion system protein F.
       0.814
Mlg_2079
TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: noc:Noc_0312 type II secretion system protein E.
       0.766
Mlg_1854
PFAM: outer membrane chaperone Skp (OmpH); KEGG: mca:MCA2446 outer membrane protein OmpH, putative.
  
     0.760
Mlg_2631
PFAM: protein of unknown function DUF494; KEGG: xoo:XOO0582 Smg.
  
     0.740
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.708
Mlg_0519
KEGG: rso:RSc1557 probable transmembrane protein.
  
     0.599
Mlg_2625
KEGG: mca:MCA2846 hypothetical protein.
  
     0.595
Mlg_1993
PFAM: Methyltransferase type 11; KEGG: pfl:PFL_3298 hypothetical protein.
  
     0.565
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.