STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2148PFAM: protein of unknown function DUF214; KEGG: gme:Gmet_3036 protein of unknown function DUF214. (408 aa)    
Predicted Functional Partners:
Mlg_2147
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_0366 ATP-binding protein of ABC transporter.
 
 0.994
Mlg_2146
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gsu:GSU0496 efflux transporter, RND family, MFP subunit.
  
 0.972
Mlg_2408
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_4015 ABC transporter-like.
 
 0.967
Mlg_1439
KEGG: mca:MCA2625 lipoprotein ABC transporter, ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.963
Mlg_1576
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_1583 ABC transporter ATPase.
 
 0.959
Mlg_1311
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2188 ABC transporter, ATP-binding protein.
 
 0.958
Mlg_1200
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1678 ABC transporter related.
 
 0.957
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.913
Mlg_2139
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdy:SDY_0787 ATP-binding component of glutamine high-affinity transport system.
 
      0.900
Mlg_1705
KEGG: sme:SMa0581 nitrate transport ATP binding protein, probable; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
      0.899
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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