STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlg_2166TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ppu:PP0803 protein secretion ABC efflux system, membrane fusion protein. (427 aa)    
Predicted Functional Partners:
Mlg_2167
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP0804 protein secretion ABC efflux system, permease and ATP-binding protein.
 
 0.995
Mlg_2168
PFAM: outer membrane efflux protein; KEGG: ppu:PP0805 outer membrane efflux protein.
 
 0.977
Mlg_2169
Hypothetical protein; KEGG: ppu:PP0806 surface adhesion protein, putative.
     
 0.797
Mlg_0122
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sru:SRU_0598 ABC transporter, multidrug efflux family.
 
 
 0.735
Mlg_2355
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sru:SRU_0598 ABC transporter, multidrug efflux family.
 
 
 0.735
Mlg_2639
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mca:MCA1277 outer membrane protein TolC, putative.
 
 
 0.646
Mlg_2170
PFAM: OmpA/MotB domain protein; KEGG: bte:BTH_II1488 outer membrane lipoprotein, OmpA/SmpA/OmlA family.
 
  
 0.589
Mlg_1407
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: cvi:CV0433 outer membrane efflux protein.
  
 
 0.580
Mlg_0943
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_2697 type I secretion outer membrane protein, TolC.
  
 
 0.576
Mlg_2145
PFAM: outer membrane efflux protein; KEGG: ava:Ava_1015 outer membrane efflux protein.
  
 
 0.559
Your Current Organism:
Alkalilimnicola ehrlichii
NCBI taxonomy Id: 187272
Other names: A. ehrlichii MLHE-1, Alkalilimnicola ehrlichii MLHE-1, Alkalilimnicola ehrlichii str. MLHE-1, Alkalilimnicola ehrlichii strain MLHE-1, Mono Lake Gammaproteobacter MLHE-1, arsenite-oxidizing bacterium MLHE-1, gamma proteobacterium MLHE-1
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